pycif-debug.Dockerfile

# Build a Docker image that contains pyCIF and all requirements.
FROM pycif/pycif-ci:0.2

# Install MPI
RUN apt-get update \
#	&& apt-get install -y mpich;
    && apt-get install -y libopenmpi-dev openmpi-bin libhdf5-openmpi-dev;

# Install NetCDF
RUN cd /tmp \
    && wget https://www.unidata.ucar.edu/downloads/netcdf/ftp/netcdf-fortran-4.5.3.tar.gz \
    && tar -xf netcdf-fortran-4.5.3.tar.gz \
    && cd netcdf-fortran-4.5.3 \
    && ./configure --prefix=${NCDIR} --disable-netcdf-4 \
    && make install;

COPY . /tmp/CIF

RUN cd /tmp/CIF/ \
    && python setup.py install

RUN cd /tmp/CIF/config_files/tuto_chimere/ \
    && python -m pycif config_chimere_fwd_academic_onespec.yml;