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Commit 0c8c7f2f authored by Espen Sollum's avatar Espen Sollum
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src/FLEXPART_MPI.f90
View file @ 0c8c7f2f
......@@ -412,7 +412,7 @@ program flexpart
if (nested_output.ne.1.and.surf_only.eq.1) call writeheader_surf
end if ! (mpif_pid == 0)
if (mp_measure_time) call mpif_mtime('iotime',0)
if (mp_measure_time) call mpif_mtime('iotime',1)
if (verbosity.gt.0 .and. lroot) then
print*,'call openreceptors'
......
src/mpi_mod.f90 100755 → 100644
View file @ 0c8c7f2f
File mode changed from 100755 to 100644
src/partoutput_average.f90 0 → 100644
View file @ 0c8c7f2f
!**********************************************************************
! Copyright 1998,1999,2000,2001,2002,2005,2007,2008,2009,2010 *
! Andreas Stohl, Petra Seibert, A. Frank, Gerhard Wotawa, *
! Caroline Forster, Sabine Eckhardt, John Burkhart, Harald Sodemann *
! *
! This file is part of FLEXPART. *
! *
! FLEXPART is free software: you can redistribute it and/or modify *
! it under the terms of the GNU General Public License as published by*
! the Free Software Foundation, either version 3 of the License, or *
! (at your option) any later version. *
! *
! FLEXPART is distributed in the hope that it will be useful, *
! but WITHOUT ANY WARRANTY; without even the implied warranty of *
! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
! GNU General Public License for more details. *
! *
! You should have received a copy of the GNU General Public License *
! along with FLEXPART. If not, see <http://www.gnu.org/licenses/>. *
!**********************************************************************
subroutine partoutput_average(itime)
! i
!*****************************************************************************
! *
! Dump all particle positions *
! *
! Author: A. Stohl *
! *
! 12 March 1999 *
! *
!*****************************************************************************
! *
! Variables: *
! *
!*****************************************************************************
use par_mod
use com_mod
implicit none
real(kind=dp) :: jul
integer :: itime,i,j,jjjjmmdd,ihmmss
integer :: ix,jy,ixp,jyp,indexh,m,il,ind,indz,indzp
real :: xlon,ylat
real :: dt1,dt2,dtt,ddx,ddy,rddx,rddy,p1,p2,p3,p4,dz1,dz2,dz
real :: topo,hm(2),hmixi,pv1(2),pvprof(2),pvi,qv1(2),qvprof(2),qvi
real :: tt1(2),ttprof(2),tti,rho1(2),rhoprof(2),rhoi
real :: tr(2),tri,zlim
character :: adate*8,atime*6
integer(kind=2) :: ishort_xlon(maxpart),ishort_ylat(maxpart),ishort_z(maxpart)
integer(kind=2) :: ishort_topo(maxpart),ishort_tro(maxpart),ishort_hmix(maxpart)
integer(kind=2) :: ishort_pv(maxpart),ishort_rho(maxpart),ishort_qv(maxpart)
integer(kind=2) :: ishort_tt(maxpart),ishort_uu(maxpart),ishort_vv(maxpart)
integer(kind=2) :: ishort_energy(maxpart)
! Determine current calendar date, needed for the file name
!**********************************************************
jul=bdate+real(itime,kind=dp)/86400._dp
call caldate(jul,jjjjmmdd,ihmmss)
write(adate,'(i8.8)') jjjjmmdd
write(atime,'(i6.6)') ihmmss
! Some variables needed for temporal interpolation
!*************************************************
dt1=real(itime-memtime(1))
dt2=real(memtime(2)-itime)
dtt=1./(dt1+dt2)
! Open output file and write the output
!**************************************
open(unitpartout_average,file=path(2)(1:length(2))//'partposit_average_'//adate// &
atime,form='unformatted',access='direct',status='replace',recl=24)
! Write current time to file
!***************************
! write(unitpartout_average) itime,numpart
do i=1,numpart
! Take only valid particles
!**************************
if (itra1(i).eq.itime) then
part_av_topo(i)=part_av_topo(i)/float(npart_av(i))
part_av_z(i)=part_av_z(i)/float(npart_av(i))
part_av_pv(i)=part_av_pv(i)/float(npart_av(i))
part_av_qv(i)=part_av_qv(i)/float(npart_av(i))
part_av_tt(i)=part_av_tt(i)/float(npart_av(i))
part_av_uu(i)=part_av_uu(i)/float(npart_av(i))
part_av_vv(i)=part_av_vv(i)/float(npart_av(i))
part_av_rho(i)=part_av_rho(i)/float(npart_av(i))
part_av_tro(i)=part_av_tro(i)/float(npart_av(i))
part_av_hmix(i)=part_av_hmix(i)/float(npart_av(i))
part_av_energy(i)=part_av_energy(i)/float(npart_av(i))
part_av_cartx(i)=part_av_cartx(i)/float(npart_av(i))
part_av_carty(i)=part_av_carty(i)/float(npart_av(i))
part_av_cartz(i)=part_av_cartz(i)/float(npart_av(i))
! Project Cartesian coordinates back onto Earth's surface
! #######################################################
xlon=atan2(part_av_cartx(i),-1.*part_av_carty(i))
ylat=atan2(part_av_cartz(i),sqrt(part_av_cartx(i)*part_av_cartx(i)+ &
part_av_carty(i)*part_av_carty(i)))
xlon=xlon/pi180
ylat=ylat/pi180
! Convert all data to integer*2 variables (from -32768 to 32767) for compressed output
!*************************************************************************************
if (xlon.gt.180.) xlon=xlon-360.
if (xlon.lt.-180.) xlon=xlon+360.
ishort_xlon(i)=nint(xlon*180.)
ishort_ylat(i)=nint(ylat*360.)
zlim=(part_av_z(i)*2.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_z(i)=nint(zlim)
zlim=(part_av_topo(i)*2.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_topo(i)=nint(zlim)
zlim=(part_av_tro(i)*2.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_tro(i)=nint(zlim)
zlim=(part_av_hmix(i)*2.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_hmix(i)=nint(zlim)
zlim=(part_av_rho(i)*20000.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_rho(i)=nint(zlim)
zlim=(part_av_qv(i)*1000000.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_qv(i)=nint(zlim)
zlim=(part_av_pv(i)*100.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_pv(i)=nint(zlim)
zlim=((part_av_tt(i)-273.15))*300.
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_tt(i)=nint(zlim)
zlim=(part_av_uu(i)*200.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_uu(i)=nint(zlim)
zlim=(part_av_vv(i)*200.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_vv(i)=nint(zlim)
zlim=(part_av_energy(i)-300000.)/30.
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_energy(i)=nint(zlim)
! Turn on for readable test output
!*********************************
! write(119,*) itime,i,xlon,ylat,part_av_z(i),part_av_topo(i),part_av_tro(i), &
! part_av_hmix(i),part_av_rho(i),part_av_qv(i),part_av_pv(i),part_av_tt(i), &
! ishort_uu(i),ishort_vv(i)
endif
! Re-initialize averages, and set number of steps to zero
npart_av(i)=0
part_av_topo(i)=0.
part_av_z(i)=0.
part_av_cartx(i)=0.
part_av_carty(i)=0.
part_av_cartz(i)=0.
part_av_pv(i)=0.
part_av_qv(i)=0.
part_av_tt(i)=0.
part_av_uu(i)=0.
part_av_vv(i)=0.
part_av_rho(i)=0.
part_av_tro(i)=0.
part_av_hmix(i)=0.
part_av_energy(i)=0.
end do
! Write the output
!*****************
do i=1,numpart
if (itra1(i).eq.itime) then
write(unitpartout_average,rec=i) ishort_xlon(i),ishort_ylat(i),ishort_z(i), &
ishort_topo(i),ishort_tro(i),ishort_hmix(i),ishort_rho(i),ishort_qv(i),ishort_pv(i), &
ishort_tt(i),ishort_uu(i),ishort_vv(i) ! ,ishort_energy(i)
endif
enddo
close(unitpartout_average)
end subroutine partoutput_average
src/partoutput_average_mpi.f90 0 → 100644
View file @ 0c8c7f2f
!**********************************************************************
! Copyright 1998,1999,2000,2001,2002,2005,2007,2008,2009,2010 *
! Andreas Stohl, Petra Seibert, A. Frank, Gerhard Wotawa, *
! Caroline Forster, Sabine Eckhardt, John Burkhart, Harald Sodemann *
! *
! This file is part of FLEXPART. *
! *
! FLEXPART is free software: you can redistribute it and/or modify *
! it under the terms of the GNU General Public License as published by*
! the Free Software Foundation, either version 3 of the License, or *
! (at your option) any later version. *
! *
! FLEXPART is distributed in the hope that it will be useful, *
! but WITHOUT ANY WARRANTY; without even the implied warranty of *
! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
! GNU General Public License for more details. *
! *
! You should have received a copy of the GNU General Public License *
! along with FLEXPART. If not, see <http://www.gnu.org/licenses/>. *
!**********************************************************************
subroutine partoutput_average(itime,irec)
! i
!*****************************************************************************
! *
! Dump all particle positions *
! *
! Author: A. Stohl *
! *
! 12 March 1999 *
! 03/2019 AST: Version for MPI *
! processes sequentially access and append data to file *
! *
! *
!*****************************************************************************
! *
! Variables: *
! *
!*****************************************************************************
use par_mod
use com_mod
use mpi_mod
implicit none
real(kind=dp) :: jul
integer :: itime,i,j,jjjjmmdd,ihmmss,irec
integer :: ix,jy,ixp,jyp,indexh,m,il,ind,indz,indzp
real :: xlon,ylat
real :: dt1,dt2,dtt,ddx,ddy,rddx,rddy,p1,p2,p3,p4,dz1,dz2,dz
real :: topo,hm(2),hmixi,pv1(2),pvprof(2),pvi,qv1(2),qvprof(2),qvi
real :: tt1(2),ttprof(2),tti,rho1(2),rhoprof(2),rhoi
real :: tr(2),tri,zlim
character :: adate*8,atime*6
character(LEN=8) :: file_stat='OLD'
integer(kind=2) :: ishort_xlon(maxpart_mpi),ishort_ylat(maxpart_mpi),ishort_z(maxpart_mpi)
integer(kind=2) :: ishort_topo(maxpart_mpi),ishort_tro(maxpart_mpi),ishort_hmix(maxpart_mpi)
integer(kind=2) :: ishort_pv(maxpart_mpi),ishort_rho(maxpart_mpi),ishort_qv(maxpart_mpi)
integer(kind=2) :: ishort_tt(maxpart_mpi),ishort_uu(maxpart_mpi),ishort_vv(maxpart_mpi)
integer(kind=2) :: ishort_energy(maxpart_mpi)
! MPI root process creates/overwrites the file, other processes append to it
if (lroot) file_stat='REPLACE'
! Determine current calendar date, needed for the file name
!**********************************************************
jul=bdate+real(itime,kind=dp)/86400._dp
call caldate(jul,jjjjmmdd,ihmmss)
write(adate,'(i8.8)') jjjjmmdd
write(atime,'(i6.6)') ihmmss
! Some variables needed for temporal interpolation
!*************************************************
dt1=real(itime-memtime(1))
dt2=real(memtime(2)-itime)
dtt=1./(dt1+dt2)
! Open output file and write the output
!**************************************
open(unitpartout_average,file=path(2)(1:length(2))//'partposit_average_'//adate// &
atime,form='unformatted',access='direct',status=file_stat,recl=24)
! Write current time to file
!***************************
! write(unitpartout_average) itime,numpart
do i=1,numpart
! Take only valid particles
!**************************
if (itra1(i).eq.itime) then
part_av_topo(i)=part_av_topo(i)/float(npart_av(i))
part_av_z(i)=part_av_z(i)/float(npart_av(i))
part_av_pv(i)=part_av_pv(i)/float(npart_av(i))
part_av_qv(i)=part_av_qv(i)/float(npart_av(i))
part_av_tt(i)=part_av_tt(i)/float(npart_av(i))
part_av_uu(i)=part_av_uu(i)/float(npart_av(i))
part_av_vv(i)=part_av_vv(i)/float(npart_av(i))
part_av_rho(i)=part_av_rho(i)/float(npart_av(i))
part_av_tro(i)=part_av_tro(i)/float(npart_av(i))
part_av_hmix(i)=part_av_hmix(i)/float(npart_av(i))
part_av_energy(i)=part_av_energy(i)/float(npart_av(i))
part_av_cartx(i)=part_av_cartx(i)/float(npart_av(i))
part_av_carty(i)=part_av_carty(i)/float(npart_av(i))
part_av_cartz(i)=part_av_cartz(i)/float(npart_av(i))
! Project Cartesian coordinates back onto Earth's surface
! #######################################################
xlon=atan2(part_av_cartx(i),-1.*part_av_carty(i))
ylat=atan2(part_av_cartz(i),sqrt(part_av_cartx(i)*part_av_cartx(i)+ &
part_av_carty(i)*part_av_carty(i)))
xlon=xlon/pi180
ylat=ylat/pi180
! Convert all data to integer*2 variables (from -32768 to 32767) for compressed output
!*************************************************************************************
if (xlon.gt.180.) xlon=xlon-360.
if (xlon.lt.-180.) xlon=xlon+360.
ishort_xlon(i)=nint(xlon*180.)
ishort_ylat(i)=nint(ylat*360.)
zlim=(part_av_z(i)*2.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_z(i)=nint(zlim)
zlim=(part_av_topo(i)*2.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_topo(i)=nint(zlim)
zlim=(part_av_tro(i)*2.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_tro(i)=nint(zlim)
zlim=(part_av_hmix(i)*2.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_hmix(i)=nint(zlim)
zlim=(part_av_rho(i)*20000.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_rho(i)=nint(zlim)
zlim=(part_av_qv(i)*1000000.-32000.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_qv(i)=nint(zlim)
zlim=(part_av_pv(i)*100.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_pv(i)=nint(zlim)
zlim=((part_av_tt(i)-273.15))*300.
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_tt(i)=nint(zlim)
zlim=(part_av_uu(i)*200.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_uu(i)=nint(zlim)
zlim=(part_av_vv(i)*200.)
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_vv(i)=nint(zlim)
zlim=(part_av_energy(i)-300000.)/30.
zlim=min(zlim,32766.)
zlim=max(zlim,-32766.)
ishort_energy(i)=nint(zlim)
! Turn on for readable test output
!*********************************
! write(119,*) itime,i,xlon,ylat,part_av_z(i),part_av_topo(i),part_av_tro(i), &
! part_av_hmix(i),part_av_rho(i),part_av_qv(i),part_av_pv(i),part_av_tt(i), &
! ishort_uu(i),ishort_vv(i)
endif
! Re-initialize averages, and set number of steps to zero
npart_av(i)=0
part_av_topo(i)=0.
part_av_z(i)=0.
part_av_cartx(i)=0.
part_av_carty(i)=0.
part_av_cartz(i)=0.
part_av_pv(i)=0.
part_av_qv(i)=0.
part_av_tt(i)=0.
part_av_uu(i)=0.
part_av_vv(i)=0.
part_av_rho(i)=0.
part_av_tro(i)=0.
part_av_hmix(i)=0.
part_av_energy(i)=0.
end do
! Write the output
!*****************
do i=1,numpart
if (itra1(i).eq.itime) then
write(unitpartout_average,rec=irec+i) ishort_xlon(i),ishort_ylat(i),ishort_z(i), &
ishort_topo(i),ishort_tro(i),ishort_hmix(i),ishort_rho(i),ishort_qv(i),ishort_pv(i), &
ishort_tt(i),ishort_uu(i),ishort_vv(i) ! ,ishort_energy(i)
endif
enddo
close(unitpartout_average)
end subroutine partoutput_average
src/partpos_average.f90 0 → 100644
View file @ 0c8c7f2f
!**********************************************************************
! Copyright 1998,1999,2000,2001,2002,2005,2007,2008,2009,2010 *
! Andreas Stohl, Petra Seibert, A. Frank, Gerhard Wotawa, *
! Caroline Forster, Sabine Eckhardt, John Burkhart, Harald Sodemann *
! *
! This file is part of FLEXPART. *
! *
! FLEXPART is free software: you can redistribute it and/or modify *
! it under the terms of the GNU General Public License as published by*
! the Free Software Foundation, either version 3 of the License, or *
! (at your option) any later version. *
! *
! FLEXPART is distributed in the hope that it will be useful, *
! but WITHOUT ANY WARRANTY; without even the implied warranty of *
! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
! GNU General Public License for more details. *
! *
! You should have received a copy of the GNU General Public License *
! along with FLEXPART. If not, see <http://www.gnu.org/licenses/>. *
!**********************************************************************
subroutine partpos_average(itime,j)
!**********************************************************************
! This subroutine averages particle quantities, to be used for particle
! dump (in partoutput.f90). Averaging is done over output interval.
!**********************************************************************
use par_mod
use com_mod
implicit none
integer :: itime,j,ix,jy,ixp,jyp,indexh,m,il,ind,indz,indzp
real :: xlon,ylat,x,y,z
real :: dt1,dt2,dtt,ddx,ddy,rddx,rddy,p1,p2,p3,p4,dz1,dz2,dz
real :: topo,hm(2),hmixi,pv1(2),pvprof(2),pvi,qv1(2),qvprof(2),qvi
real :: tt1(2),ttprof(2),tti,rho1(2),rhoprof(2),rhoi
real :: uu1(2),uuprof(2),uui,vv1(2),vvprof(2),vvi
real :: tr(2),tri,energy
! Some variables needed for temporal interpolation
!*************************************************
dt1=real(itime-memtime(1))
dt2=real(memtime(2)-itime)
dtt=1./(dt1+dt2)
xlon=xlon0+xtra1(j)*dx
ylat=ylat0+ytra1(j)*dy
!*****************************************************************************
! Interpolate several variables (PV, specific humidity, etc.) to particle position
!*****************************************************************************
ix=xtra1(j)
jy=ytra1(j)
ixp=ix+1
jyp=jy+1
ddx=xtra1(j)-real(ix)
ddy=ytra1(j)-real(jy)
rddx=1.-ddx
rddy=1.-ddy
p1=rddx*rddy
p2=ddx*rddy
p3=rddx*ddy
p4=ddx*ddy
! eso: Temporary fix for particle exactly at north pole
if (jyp >= nymax) then
! write(*,*) 'WARNING: conccalc.f90 jyp >= nymax'
jyp=jyp-1
end if
! Topography
!***********
topo=p1*oro(ix,jy)+p2*oro(ixp,jy)+p3*oro(ix,jyp)+p4*oro(ixp,jyp)
! Potential vorticity, specific humidity, temperature, and density
!*****************************************************************
do il=2,nz
if (height(il).gt.ztra1(j)) then
indz=il-1
indzp=il
goto 6
endif
end do
6 continue
dz1=ztra1(j)-height(indz)
dz2=height(indzp)-ztra1(j)
dz=1./(dz1+dz2)
do ind=indz,indzp
do m=1,2
indexh=memind(m)
! Potential vorticity
pv1(m)=p1*pv(ix ,jy ,ind,indexh) &
+p2*pv(ixp,jy ,ind,indexh) &
+p3*pv(ix ,jyp,ind,indexh) &
+p4*pv(ixp,jyp,ind,indexh)
! Specific humidity
qv1(m)=p1*qv(ix ,jy ,ind,indexh) &
+p2*qv(ixp,jy ,ind,indexh) &
+p3*qv(ix ,jyp,ind,indexh) &
+p4*qv(ixp,jyp,ind,indexh)
! Temperature
tt1(m)=p1*tt(ix ,jy ,ind,indexh) &
+p2*tt(ixp,jy ,ind,indexh) &
+p3*tt(ix ,jyp,ind,indexh) &
+p4*tt(ixp,jyp,ind,indexh)
! U wind
uu1(m)=p1*uu(ix ,jy ,ind,indexh) &
+p2*uu(ixp,jy ,ind,indexh) &
+p3*uu(ix ,jyp,ind,indexh) &
+p4*uu(ixp,jyp,ind,indexh)
! V wind
vv1(m)=p1*vv(ix ,jy ,ind,indexh)