concoutput_surf_mpi.f90 22.2 KB
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subroutine concoutput_surf(itime,outnum,gridtotalunc,wetgridtotalunc, &
       drygridtotalunc)
  !                        i     i          o             o
  !       o
  !*****************************************************************************
  !                                                                            *
  !     Output of the concentration grid and the receptor concentrations.      *
  !                                                                            *
  !     Author: A. Stohl                                                       *
  !                                                                            *
  !     24 May 1995                                                            *
  !                                                                            *
  !     13 April 1999, Major update: if output size is smaller, dump output    *
  !                    in sparse matrix format; additional output of           *
  !                    uncertainty                                             *
  !                                                                            *
  !     05 April 2000, Major update: output of age classes; output for backward*
  !                    runs is time spent in grid cell times total mass of     *
  !                    species.                                                *
  !                                                                            *
  !     17 February 2002, Appropriate dimensions for backward and forward runs *
  !                       are now specified in file par_mod                    *
  !                                                                            *
  !     June 2006, write grid in sparse matrix with a single write command     *
  !                in order to save disk space                                 *
  !                                                                            *
  !     2008 new sparse matrix format                                          *
  !                                                                            *
  !     Changes eso:                                                           *
  !     2014        MPI version    This routine is only called by root MPI     *
  !                                process (the other processes have sent      *
  !                                their fields to root)                       *
  !                                                                            *
  !*****************************************************************************
  !                                                                            *
  ! Variables:                                                                 *
  ! outnum          number of samples                                          *
  ! ncells          number of cells with non-zero concentrations               *
  ! sparse          .true. if in sparse matrix format, else .false.            *
  ! tot_mu          1 for forward, initial mass mixing ration for backw. runs  *
  !                                                                            *
  !*****************************************************************************

  use unc_mod
  use point_mod
  use outg_mod
  use par_mod
  use com_mod
  use mpi_mod
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  use mean_mod
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  implicit none

  real(kind=dp) :: jul
  integer :: itime,i,ix,jy,kz,ks,kp,l,iix,jjy,kzz,nage,jjjjmmdd,ihmmss
  integer :: sp_count_i,sp_count_r
  real :: sp_fact
  real :: outnum,densityoutrecept(maxreceptor),xl,yl

  !real densityoutgrid(0:numxgrid-1,0:numygrid-1,numzgrid),
  !    +grid(0:numxgrid-1,0:numygrid-1,numzgrid,maxspec,maxpointspec_act,
  !    +    maxageclass)
  !real wetgrid(0:numxgrid-1,0:numygrid-1,maxspec,maxpointspec_act,
  !    +       maxageclass)
  !real drygrid(0:numxgrid-1,0:numygrid-1,maxspec,
  !    +       maxpointspec_act,maxageclass)
  !real gridsigma(0:numxgrid-1,0:numygrid-1,numzgrid,maxspec,
  !    +       maxpointspec_act,maxageclass),
  !    +     drygridsigma(0:numxgrid-1,0:numygrid-1,maxspec,
  !    +     maxpointspec_act,maxageclass),
  !    +     wetgridsigma(0:numxgrid-1,0:numygrid-1,maxspec,
  !    +     maxpointspec_act,maxageclass)
  !real factor(0:numxgrid-1,0:numygrid-1,numzgrid)
  !real sparse_dump_r(numxgrid*numygrid*numzgrid)
  !integer sparse_dump_i(numxgrid*numygrid*numzgrid)

  !real sparse_dump_u(numxgrid*numygrid*numzgrid)
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  real(dep_prec) :: auxgrid(nclassunc)
  real(sp) :: gridtotal,gridsigmatotal,gridtotalunc
  real(dep_prec) :: wetgridtotal,wetgridsigmatotal,wetgridtotalunc
  real(dep_prec) :: drygridtotal,drygridsigmatotal,drygridtotalunc
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  real :: halfheight,dz,dz1,dz2,tot_mu(maxspec,maxpointspec_act)
  real,parameter :: smallnum = tiny(0.0) ! smallest number that can be handled
  real,parameter :: weightair=28.97
  logical :: sp_zer
  character :: adate*8,atime*6
  character(len=3) :: anspec
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  integer :: mind
! mind        eso:added to get consistent results between 2&3-fields versions
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! Measure execution time
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  if (mp_measure_time) call mpif_mtime('rootonly',0)
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  ! Determine current calendar date, needed for the file name
  !**********************************************************

  jul=bdate+real(itime,kind=dp)/86400._dp
  call caldate(jul,jjjjmmdd,ihmmss)
  write(adate,'(i8.8)') jjjjmmdd
  write(atime,'(i6.6)') ihmmss
  !write(unitdates,'(a)') adate//atime

    open(unitdates,file=path(2)(1:length(2))//'dates', ACCESS='APPEND')
      write(unitdates,'(a)') adate//atime
    close(unitdates)

  ! For forward simulations, output fields have dimension MAXSPEC,
  ! for backward simulations, output fields have dimension MAXPOINT.
  ! Thus, make loops either about nspec, or about numpoint
  !*****************************************************************


  if (ldirect.eq.1) then
    do ks=1,nspec
      do kp=1,maxpointspec_act
        tot_mu(ks,kp)=1
      end do
    end do
  else
    do ks=1,nspec
      do kp=1,maxpointspec_act
        tot_mu(ks,kp)=xmass(kp,ks)
      end do
    end do
  endif


  if (verbosity.eq.1) then
     print*,'concoutput_surf 2'
     CALL SYSTEM_CLOCK(count_clock)
     WRITE(*,*) 'SYSTEM_CLOCK',count_clock - count_clock0   
  endif

  !*******************************************************************
  ! Compute air density: sufficiently accurate to take it
  ! from coarse grid at some time
  ! Determine center altitude of output layer, and interpolate density
  ! data to that altitude
  !*******************************************************************

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  mind=memind(2)
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  do kz=1,numzgrid
    if (kz.eq.1) then
      halfheight=outheight(1)/2.
    else
      halfheight=(outheight(kz)+outheight(kz-1))/2.
    endif
    do kzz=2,nz
      if ((height(kzz-1).lt.halfheight).and. &
           (height(kzz).gt.halfheight)) goto 46
    end do
46   kzz=max(min(kzz,nz),2)
    dz1=halfheight-height(kzz-1)
    dz2=height(kzz)-halfheight
    dz=dz1+dz2
    do jy=0,numygrid-1
      do ix=0,numxgrid-1
        xl=outlon0+real(ix)*dxout
        yl=outlat0+real(jy)*dyout
        xl=(xl-xlon0)/dx
        yl=(yl-ylat0)/dy
        iix=max(min(nint(xl),nxmin1),0)
        jjy=max(min(nint(yl),nymin1),0)
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        ! densityoutgrid(ix,jy,kz)=(rho(iix,jjy,kzz,2)*dz1+ &
        !      rho(iix,jjy,kzz-1,2)*dz2)/dz
        densityoutgrid(ix,jy,kz)=(rho(iix,jjy,kzz,mind)*dz1+ &
             rho(iix,jjy,kzz-1,mind)*dz2)/dz
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      end do
    end do
  end do

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  do i=1,numreceptor
    xl=xreceptor(i)
    yl=yreceptor(i)
    iix=max(min(nint(xl),nxmin1),0)
    jjy=max(min(nint(yl),nymin1),0)
    !densityoutrecept(i)=rho(iix,jjy,1,2)
    densityoutrecept(i)=rho(iix,jjy,1,mind)
  end do
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  ! Output is different for forward and backward simulations
    do kz=1,numzgrid
      do jy=0,numygrid-1
        do ix=0,numxgrid-1
          if (ldirect.eq.1) then
            factor3d(ix,jy,kz)=1.e12/volume(ix,jy,kz)/outnum
          else
            factor3d(ix,jy,kz)=real(abs(loutaver))/outnum
          endif
        end do
      end do
    end do

  !*********************************************************************
  ! Determine the standard deviation of the mean concentration or mixing
  ! ratio (uncertainty of the output) and the dry and wet deposition
  !*********************************************************************

  if (verbosity.eq.1) then
     print*,'concoutput_surf 3 (sd)'
     CALL SYSTEM_CLOCK(count_clock)
     WRITE(*,*) 'SYSTEM_CLOCK',count_clock - count_clock0   
  endif
  gridtotal=0.
  gridsigmatotal=0.
  gridtotalunc=0.
  wetgridtotal=0.
  wetgridsigmatotal=0.
  wetgridtotalunc=0.
  drygridtotal=0.
  drygridsigmatotal=0.
  drygridtotalunc=0.

  do ks=1,nspec

  write(anspec,'(i3.3)') ks
  if ((iout.eq.1).or.(iout.eq.3).or.(iout.eq.5)) then
    if (ldirect.eq.1) then
      open(unitoutgrid,file=path(2)(1:length(2))//'grid_conc_'//adate// &
           atime//'_'//anspec,form='unformatted')
    else
      open(unitoutgrid,file=path(2)(1:length(2))//'grid_time_'//adate// &
           atime//'_'//anspec,form='unformatted')
    endif
     write(unitoutgrid) itime
   endif

  if ((iout.eq.2).or.(iout.eq.3)) then      ! mixing ratio
   open(unitoutgridppt,file=path(2)(1:length(2))//'grid_pptv_'//adate// &
        atime//'_'//anspec,form='unformatted')

    write(unitoutgridppt) itime
  endif

  do kp=1,maxpointspec_act
  do nage=1,nageclass

    do jy=0,numygrid-1
      do ix=0,numxgrid-1

  ! WET DEPOSITION
        if ((WETDEP).and.(ldirect.gt.0)) then
            do l=1,nclassunc
              auxgrid(l)=wetgridunc0(ix,jy,ks,kp,l,nage)
            end do
            call mean(auxgrid,wetgrid(ix,jy), &
                 wetgridsigma(ix,jy),nclassunc)
  ! Multiply by number of classes to get total concentration
            wetgrid(ix,jy)=wetgrid(ix,jy) &
                 *nclassunc
            wetgridtotal=wetgridtotal+wetgrid(ix,jy)
  ! Calculate standard deviation of the mean
            wetgridsigma(ix,jy)= &
                 wetgridsigma(ix,jy)* &
                 sqrt(real(nclassunc))
            wetgridsigmatotal=wetgridsigmatotal+ &
                 wetgridsigma(ix,jy)
        endif

  ! DRY DEPOSITION
        if ((DRYDEP).and.(ldirect.gt.0)) then
            do l=1,nclassunc
              auxgrid(l)=drygridunc0(ix,jy,ks,kp,l,nage)
            end do
            call mean(auxgrid,drygrid(ix,jy), &
                 drygridsigma(ix,jy),nclassunc)
  ! Multiply by number of classes to get total concentration
            drygrid(ix,jy)=drygrid(ix,jy)* &
                 nclassunc
            drygridtotal=drygridtotal+drygrid(ix,jy)
  ! Calculate standard deviation of the mean
            drygridsigma(ix,jy)= &
                 drygridsigma(ix,jy)* &
                 sqrt(real(nclassunc))
125         drygridsigmatotal=drygridsigmatotal+ &
                 drygridsigma(ix,jy)
        endif

  ! CONCENTRATION OR MIXING RATIO
        do kz=1,numzgrid
            do l=1,nclassunc
              auxgrid(l)=gridunc(ix,jy,kz,ks,kp,l,nage)
            end do
            call mean(auxgrid,grid(ix,jy,kz), &
                 gridsigma(ix,jy,kz),nclassunc)
  ! Multiply by number of classes to get total concentration
            grid(ix,jy,kz)= &
                 grid(ix,jy,kz)*nclassunc
            gridtotal=gridtotal+grid(ix,jy,kz)
  ! Calculate standard deviation of the mean
            gridsigma(ix,jy,kz)= &
                 gridsigma(ix,jy,kz)* &
                 sqrt(real(nclassunc))
            gridsigmatotal=gridsigmatotal+ &
                 gridsigma(ix,jy,kz)
        end do
      end do
    end do


  !*******************************************************************
  ! Generate output: may be in concentration (ng/m3) or in mixing
  ! ratio (ppt) or both
  ! Output the position and the values alternated multiplied by
  ! 1 or -1, first line is number of values, number of positions
  ! For backward simulations, the unit is seconds, stored in grid_time
  !*******************************************************************

  if (verbosity.eq.1) then
     print*,'concoutput_surf 4 (output)'
     CALL SYSTEM_CLOCK(count_clock)
     WRITE(*,*) 'SYSTEM_CLOCK',count_clock - count_clock0   
  endif

  ! Concentration output
  !*********************

  if ((iout.eq.1).or.(iout.eq.3).or.(iout.eq.5)) then

  if (verbosity.eq.1) then
     print*,'concoutput_surf (Wet deposition)'
     CALL SYSTEM_CLOCK(count_clock)
     WRITE(*,*) 'SYSTEM_CLOCK',count_clock - count_clock0   
  endif

  ! Wet deposition
         sp_count_i=0
         sp_count_r=0
         sp_fact=-1.
         sp_zer=.true.
         if ((ldirect.eq.1).and.(WETDEP)) then
         do jy=0,numygrid-1
            do ix=0,numxgrid-1
  ! concentraion greater zero
              if (wetgrid(ix,jy).gt.smallnum) then
                 if (sp_zer.eqv..true.) then ! first non zero value
                    sp_count_i=sp_count_i+1
                    sparse_dump_i(sp_count_i)=ix+jy*numxgrid
                    sp_zer=.false.
                    sp_fact=sp_fact*(-1.)
                 endif
                 sp_count_r=sp_count_r+1
                 sparse_dump_r(sp_count_r)= &
                      sp_fact*1.e12*wetgrid(ix,jy)/area(ix,jy)
                 sparse_dump_u(sp_count_r)= &
                      1.e12*wetgridsigma(ix,jy)/area(ix,jy)
              else ! concentration is zero
                  sp_zer=.true.
              endif
            end do
         end do
         else
            sp_count_i=0
            sp_count_r=0
         endif
         write(unitoutgrid) sp_count_i
         write(unitoutgrid) (sparse_dump_i(i),i=1,sp_count_i)
         write(unitoutgrid) sp_count_r
         write(unitoutgrid) (sparse_dump_r(i),i=1,sp_count_r)
!         write(unitoutgrid) (sparse_dump_u(i),i=1,sp_count_r)

  if (verbosity.eq.1) then
     print*,'concoutput_surf (Dry deposition)'
     CALL SYSTEM_CLOCK(count_clock)
     WRITE(*,*) 'SYSTEM_CLOCK',count_clock - count_clock0   
  endif
  ! Dry deposition
         sp_count_i=0
         sp_count_r=0
         sp_fact=-1.
         sp_zer=.true.
         if ((ldirect.eq.1).and.(DRYDEP)) then
          do jy=0,numygrid-1
            do ix=0,numxgrid-1
              if (drygrid(ix,jy).gt.smallnum) then
                 if (sp_zer.eqv..true.) then ! first non zero value
                    sp_count_i=sp_count_i+1
                    sparse_dump_i(sp_count_i)=ix+jy*numxgrid
                    sp_zer=.false.
                    sp_fact=sp_fact*(-1.)
                 endif
                 sp_count_r=sp_count_r+1
                 sparse_dump_r(sp_count_r)= &
                      sp_fact* &
                      1.e12*drygrid(ix,jy)/area(ix,jy)
                  sparse_dump_u(sp_count_r)= &
                      1.e12*drygridsigma(ix,jy)/area(ix,jy)
              else ! concentration is zero
                  sp_zer=.true.
              endif
            end do
          end do
         else
            sp_count_i=0
            sp_count_r=0
         endif
         write(unitoutgrid) sp_count_i
         write(unitoutgrid) (sparse_dump_i(i),i=1,sp_count_i)
         write(unitoutgrid) sp_count_r
         write(unitoutgrid) (sparse_dump_r(i),i=1,sp_count_r)
!         write(unitoutgrid) (sparse_dump_u(i),i=1,sp_count_r)

  if (verbosity.eq.1) then
     print*,'concoutput_surf (Concentrations)'
     CALL SYSTEM_CLOCK(count_clock)
     WRITE(*,*) 'SYSTEM_CLOCK',count_clock - count_clock0   
  endif

  ! Concentrations

  ! surf_only write only 1st layer 

         sp_count_i=0
         sp_count_r=0
         sp_fact=-1.
         sp_zer=.true.
          do kz=1,1
            do jy=0,numygrid-1
              do ix=0,numxgrid-1
                if (grid(ix,jy,kz).gt.smallnum) then
                  if (sp_zer.eqv..true.) then ! first non zero value
                    sp_count_i=sp_count_i+1
                    sparse_dump_i(sp_count_i)= &
                         ix+jy*numxgrid+kz*numxgrid*numygrid
                    sp_zer=.false.
                    sp_fact=sp_fact*(-1.)
                  endif
                   sp_count_r=sp_count_r+1
                   sparse_dump_r(sp_count_r)= &
                        sp_fact* &
                        grid(ix,jy,kz)* &
                        factor3d(ix,jy,kz)/tot_mu(ks,kp)
  !                 if ((factor(ix,jy,kz)/tot_mu(ks,kp)).eq.0)
  !    +              write (*,*) factor(ix,jy,kz),tot_mu(ks,kp),ks,kp
                   sparse_dump_u(sp_count_r)= &
                        gridsigma(ix,jy,kz)* &
                        factor3d(ix,jy,kz)/tot_mu(ks,kp)
                else ! concentration is zero
                  sp_zer=.true.
                endif
             end do
           end do
         end do
         write(unitoutgrid) sp_count_i
         write(unitoutgrid) (sparse_dump_i(i),i=1,sp_count_i)
         write(unitoutgrid) sp_count_r
         write(unitoutgrid) (sparse_dump_r(i),i=1,sp_count_r)
!         write(unitoutgrid) (sparse_dump_u(i),i=1,sp_count_r)

  endif !  concentration output

  ! Mixing ratio output
  !********************

  if ((iout.eq.2).or.(iout.eq.3)) then      ! mixing ratio

  ! Wet deposition
         sp_count_i=0
         sp_count_r=0
         sp_fact=-1.
         sp_zer=.true.
         if ((ldirect.eq.1).and.(WETDEP)) then
          do jy=0,numygrid-1
            do ix=0,numxgrid-1
                if (wetgrid(ix,jy).gt.smallnum) then
                  if (sp_zer.eqv..true.) then ! first non zero value
                    sp_count_i=sp_count_i+1
                    sparse_dump_i(sp_count_i)= &
                         ix+jy*numxgrid
                    sp_zer=.false.
                    sp_fact=sp_fact*(-1.)
                 endif
                 sp_count_r=sp_count_r+1
                 sparse_dump_r(sp_count_r)= &
                      sp_fact* &
                      1.e12*wetgrid(ix,jy)/area(ix,jy)
                 sparse_dump_u(sp_count_r)= &
                      1.e12*wetgridsigma(ix,jy)/area(ix,jy)
              else ! concentration is zero
                  sp_zer=.true.
              endif
            end do
          end do
         else
           sp_count_i=0
           sp_count_r=0
         endif
         write(unitoutgridppt) sp_count_i
         write(unitoutgridppt) (sparse_dump_i(i),i=1,sp_count_i)
         write(unitoutgridppt) sp_count_r
         write(unitoutgridppt) (sparse_dump_r(i),i=1,sp_count_r)
!         write(unitoutgridppt) (sparse_dump_u(i),i=1,sp_count_r)


  ! Dry deposition
         sp_count_i=0
         sp_count_r=0
         sp_fact=-1.
         sp_zer=.true.
         if ((ldirect.eq.1).and.(DRYDEP)) then
          do jy=0,numygrid-1
            do ix=0,numxgrid-1
                if (drygrid(ix,jy).gt.smallnum) then
                  if (sp_zer.eqv..true.) then ! first non zero value
                    sp_count_i=sp_count_i+1
                    sparse_dump_i(sp_count_i)= &
                         ix+jy*numxgrid
                    sp_zer=.false.
                    sp_fact=sp_fact*(-1)
                 endif
                 sp_count_r=sp_count_r+1
                 sparse_dump_r(sp_count_r)= &
                      sp_fact* &
                      1.e12*drygrid(ix,jy)/area(ix,jy)
                 sparse_dump_u(sp_count_r)= &
                      1.e12*drygridsigma(ix,jy)/area(ix,jy)
              else ! concentration is zero
                  sp_zer=.true.
              endif
            end do
          end do
         else
           sp_count_i=0
           sp_count_r=0
         endif
         write(unitoutgridppt) sp_count_i
         write(unitoutgridppt) (sparse_dump_i(i),i=1,sp_count_i)
         write(unitoutgridppt) sp_count_r
         write(unitoutgridppt) (sparse_dump_r(i),i=1,sp_count_r)
!         write(unitoutgridppt) (sparse_dump_u(i),i=1,sp_count_r)


  ! Mixing ratios

  ! surf_only write only 1st layer 

         sp_count_i=0
         sp_count_r=0
         sp_fact=-1.
         sp_zer=.true.
          do kz=1,1
            do jy=0,numygrid-1
              do ix=0,numxgrid-1
                if (grid(ix,jy,kz).gt.smallnum) then
                  if (sp_zer.eqv..true.) then ! first non zero value
                    sp_count_i=sp_count_i+1
                    sparse_dump_i(sp_count_i)= &
                         ix+jy*numxgrid+kz*numxgrid*numygrid
                    sp_zer=.false.
                    sp_fact=sp_fact*(-1.)
                 endif
                 sp_count_r=sp_count_r+1
                 sparse_dump_r(sp_count_r)= &
                      sp_fact* &
                      1.e12*grid(ix,jy,kz) &
                      /volume(ix,jy,kz)/outnum* &
                      weightair/weightmolar(ks)/densityoutgrid(ix,jy,kz)
                 sparse_dump_u(sp_count_r)= &
                      1.e12*gridsigma(ix,jy,kz)/volume(ix,jy,kz)/ &
                      outnum*weightair/weightmolar(ks)/ &
                      densityoutgrid(ix,jy,kz)
              else ! concentration is zero
                  sp_zer=.true.
              endif
              end do
            end do
          end do
         write(unitoutgridppt) sp_count_i
         write(unitoutgridppt) (sparse_dump_i(i),i=1,sp_count_i)
         write(unitoutgridppt) sp_count_r
         write(unitoutgridppt) (sparse_dump_r(i),i=1,sp_count_r)
!         write(unitoutgridppt) (sparse_dump_u(i),i=1,sp_count_r)

      endif ! output for ppt

  end do
  end do

    close(unitoutgridppt)
    close(unitoutgrid)

  end do

  if (gridtotal.gt.0.) gridtotalunc=gridsigmatotal/gridtotal
  if (wetgridtotal.gt.0.) wetgridtotalunc=wetgridsigmatotal/ &
       wetgridtotal
  if (drygridtotal.gt.0.) drygridtotalunc=drygridsigmatotal/ &
       drygridtotal

  ! Dump of receptor concentrations

  if (numreceptor.gt.0 .and. (iout.eq.2 .or. iout.eq.3)  ) then
    write(unitoutreceptppt) itime
    do ks=1,nspec
      write(unitoutreceptppt) (1.e12*creceptor(i,ks)/outnum* &
           weightair/weightmolar(ks)/densityoutrecept(i),i=1,numreceptor)
    end do
  endif

  ! Dump of receptor concentrations

  if (numreceptor.gt.0) then
    write(unitoutrecept) itime
    do ks=1,nspec
      write(unitoutrecept) (1.e12*creceptor(i,ks)/outnum, &
           i=1,numreceptor)
    end do
  endif



  ! Reinitialization of grid
  !*************************

  do ks=1,nspec
    do kp=1,maxpointspec_act
      do i=1,numreceptor
        creceptor(i,ks)=0.
      end do
      do jy=0,numygrid-1
        do ix=0,numxgrid-1
          do l=1,nclassunc
            do nage=1,nageclass
              do kz=1,numzgrid
                gridunc(ix,jy,kz,ks,kp,l,nage)=0.
              end do
            end do
          end do
        end do
      end do
    end do
  end do

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  if (mp_measure_time) call mpif_mtime('rootonly',1)
  
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end subroutine concoutput_surf