GitLab

Summary

PluginError when trying to run pycif with TM5 (f8c6604f)

Steps to reproduce

I'm trying to run pycif-TM5 with the attached yaml file.

What is the current bug behavior?

pycif crashes with a pycif PluginError:

pycif.utils.check.errclass.PluginError: This is the default empty ini_mapper method

What is the expected correct behavior?

At the very least a useful link to documentation about this ini_mapper method.

Relevant logs and/or screenshots

yaml file: jvp_obsvec.yml
log file: jvp_obsvec.log
Traceback:

Traceback (most recent call last):
  File "/opt/miniconda3/envs/cif/lib/python3.7/runpy.py", line 193, in _run_module_as_main
    "__main__", mod_spec)
  File "/opt/miniconda3/envs/cif/lib/python3.7/runpy.py", line 85, in _run_code
    exec(code, run_globals)
  File "/home/jpt930/werk/verify/cif/src/pycif/__main__.py", line 30, in <module>
    main()
  File "/home/jpt930/werk/verify/cif/src/pycif/__main__.py", line 26, in main
    Setup.run_simu(args)
  File "/home/jpt930/werk/verify/cif/src/pycif/utils/classes/setup.py", line 23, in run_simu
    setup = cls.load_config(setup)
  File "/home/jpt930/werk/verify/cif/src/pycif/utils/classes/setup.py", line 80, in load_config
    cls.load_setup(setup, level=0)
  File "/home/jpt930/werk/verify/cif/src/pycif/utils/classes/setup.py", line 251, in load_setup
    plg_attr, parent_plg_type, level, **kwargs
  File "/home/jpt930/werk/verify/cif/src/pycif/utils/classes/setup.py", line 407, in _check_requirements
    cls.load_setup(plg, parent_plg_type, level + 1, **kwargs)
  File "/home/jpt930/werk/verify/cif/src/pycif/utils/classes/setup.py", line 260, in load_setup
    plg_attr.ini_data(**kwargs)
  File "/home/jpt930/werk/verify/cif/src/pycif/plugins/obsoperators/standard/__init__.py", line 43, in ini_data
    init_transform(plugin)
  File "/home/jpt930/werk/verify/cif/src/pycif/plugins/obsoperators/standard/transforms/__init__.py", line 25, in init_transform
    all_inputs, all_outputs, backup_comps, mapper)
  File "/home/jpt930/werk/verify/cif/src/pycif/plugins/obsoperators/standard/transforms/init_model.py", line 23, in init_model
    outputs=all_outputs
  File "/home/jpt930/werk/verify/cif/src/pycif/plugins/obsoperators/standard/transforms/utils.py", line 47, in add_default
    backup_comps=backup_comps,
  File "/home/jpt930/werk/verify/cif/src/pycif/plugins/transforms/run_model/__init__.py", line 12, in ini_mapper
    inputs, outputs, backup_comps
  File "/home/jpt930/werk/verify/cif/src/pycif/utils/classes/models.py", line 116, in ini_mapper
    raise PluginError("This is the default empty ini_mapper method")
pycif.utils.check.errclass.PluginError: This is the default empty ini_mapper method

Possible fixes

A link to clear documentation about this ini_mapper method. It's present in other models in pycif, but it is not documented at all: not in the source code itself, nor in the online documentation.